EnhancerDB
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  3. rs562834680[chr2:240202396]
Enhancers that have rs562834680[chr2:240202396]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 240159334 240219661 enh6224
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr2 240201720 240202445 vista35502
VISTA
Transcript factors that have rs562834680[chr2:240202396]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 240202381 240202396 RFX5 JASPAR yes 22245965
chr2 240202381 240202396 RFX5 JASPAR yes 82225399
chr2 240202394 240202400 YY1 JASPAR yes 22245967
chr2 240202394 240202400 YY1 JASPAR yes 82225401
Genes associated with rs562834680[chr2:240202396], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More