EnhancerDB
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  3. rs562840310[chr2:240212564]
Enhancers that have rs562840310[chr2:240212564]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 240159334 240219661 enh6224
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs562840310[chr2:240212564]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 240212551 240212566 TFAP2C JASPAR yes 82226771
chr2 240212553 240212566 TFAP2A JASPAR yes 82226772
chr2 240212553 240212566 TFAP2B JASPAR yes 82226773
chr2 240212553 240212566 TFAP2C JASPAR yes 82226774
chr2 240212554 240212565 EBF1 JASPAR yes 82226775
Genes associated with rs562840310[chr2:240212564], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More