EnhancerDB
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  3. rs562856572[chr1:41859979]
Enhancers that have rs562856572[chr1:41859979]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 41849805 41888800 enh11788
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs562856572[chr1:41859979]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 41859966 41859979 NR2F1 JASPAR yes 28384562
chr1 41859977 41859998 ZNF263 JASPAR yes 28384565
chr1 41859979 41860000 ZNF263 JASPAR yes 28384566
Genes associated with rs562856572[chr1:41859979], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More