EnhancerDB
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  3. rs562869936[chr6:30792862]
Enhancers that have rs562869936[chr6:30792862]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 30740965 30818275 enh23149
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs562869936[chr6:30792862]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 30792859 30792864 ETS2 TRANSFAC yes 101055568
chr6 30792860 30792874 POU4F1 JASPAR yes 101055569
chr6 30792860 30792876 POU4F3 JASPAR yes 101055570
Genes associated with rs562869936[chr6:30792862], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More