EnhancerDB
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  3. rs562874899[chr11:65188355]
Enhancers that have rs562874899[chr11:65188355]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 65180298 65217415 enh1825
Bone Marrow (K562) Brain (SK-N-MC) Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Kidney Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs562874899[chr11:65188355]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 65183437 65204678 POLR2A UCSC Txn Factor no Conserved 107977988
chr11 65183437 65204678 POLR2A UCSC Txn Factor no Conserved 107977989
chr11 65183437 65204678 POLR2A UCSC Txn Factor no Conserved 107977990
chr11 65187904 65188813 TCF7L2 GTRD no Colon (HCT116) 21491946
chr11 65187904 65188813 TCF7L2 GTRD no Colon (HCT116) 107978417
chr11 65187912 65188732 ZNF143 GTRD no Epithelial (MCF-7) 107978418
chr11 65187957 65188853 TCF7L2 GTRD no Colon (HCT116) 21491947
chr11 65187957 65188853 TCF7L2 GTRD no Colon (HCT116) 107978419
chr11 65187975 65188946 TCF7L2 GTRD no Colon (HCT116) 21491948
chr11 65187975 65188946 TCF7L2 GTRD no Colon (HCT116) 107978420
chr11 65188266 65189845 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21491949
chr11 65188321 65189962 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21491950
Genes associated with rs562874899[chr11:65188355], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More