EnhancerDB
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  3. rs562895711[chr1:52090286]
Enhancers that have rs562895711[chr1:52090286]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 52082245 52099655 enh11847
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Esophagus Astrocyte Stomach Placenta Colon (HCT116) Uterus Lung (PC-9) Pancreas (Panc1) Neural Stem Cells (H9) Heart
Transcript factors that have rs562895711[chr1:52090286]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 52090274 52090289 FOXP1 JASPAR yes 28855604
chr1 52090274 52090289 MEF2C JASPAR yes 28855605
chr1 52090274 52090295 IRF1 JASPAR yes 28855606
chr1 52090275 52090290 MEF2A JASPAR yes 28855607
chr1 52090276 52090288 FOXC2 JASPAR yes 28855608
chr1 52090276 52090288 MEF2A JASPAR yes 28855609
chr1 52090276 52090288 MEF2B JASPAR yes 28855610
chr1 52090276 52090288 MEF2D JASPAR yes 28855611
chr1 52090277 52090287 MEF2A JASPAR yes 28855612
chr1 52090279 52090291 IRF1 JASPAR yes 28855613
chr1 52090280 52090295 MEF2C JASPAR yes 28855614
chr1 52090280 52090301 IRF1 JASPAR yes 28855615
chr1 52090281 52090296 MEF2A JASPAR yes 28855616
chr1 52090282 52090294 FOXC2 JASPAR yes 28855617
chr1 52090282 52090294 MEF2A JASPAR yes 28855618
chr1 52090282 52090294 MEF2B JASPAR yes 28855619
chr1 52090282 52090294 MEF2D JASPAR yes 28855620
chr1 52090283 52090293 MEF2A JASPAR yes 28855621
Genes associated with rs562895711[chr1:52090286], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More