EnhancerDB
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  3. rs562899899[chr12:125182078]
Enhancers that have rs562899899[chr12:125182078]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125176905 125261395 enh2676
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs562899899[chr12:125182078]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125182064 125182081 PAX9 JASPAR yes 124410242
chr12 125182068 125182082 TLX1 JASPAR yes 124410243
chr12 125182068 125182086 ESR2 JASPAR yes 124410244
chr12 125182069 125182086 ESR1 JASPAR yes 124410245
chr12 125182072 125182093 ZNF263 JASPAR yes 124410246
Genes associated with rs562899899[chr12:125182078], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More