EnhancerDB
  1. Home
  2. SNP
  3. rs562957578[chr5:79476668]
Enhancers that have rs562957578[chr5:79476668]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 79474525 79496555 enh22393
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs562957578[chr5:79476668]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 79476666 79476670 LFA1 TRANSFAC yes 63702589
chr5 79476666 79476682 SOX4 JASPAR yes 63702590
Genes associated with rs562957578[chr5:79476668], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More