EnhancerDB
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  3. rs563013408[chr1:27986520]
Enhancers that have rs563013408[chr1:27986520]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27968485 27992074 enh178
Bone Marrow (K562) Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Placenta Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs563013408[chr1:27986520]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27985066 27986616 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107802613
chr1 27985066 27986616 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107802614
chr1 27985066 27986616 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107802615
chr1 27986513 27986524 NRF1 JASPAR yes 27719810
chr1 27986520 27986525 SP1 TRANSFAC yes 27719811
chr1 27986520 27986526 SP1 TRANSFAC yes 27719812
Genes associated with rs563013408[chr1:27986520], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More