EnhancerDB
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  3. rs563052709[chr1:235125970]
Enhancers that have rs563052709[chr1:235125970]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 235087405 235127975 enh996
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs563052709[chr1:235125970]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 235124808 235126532 ZNF274 GTRD no Bone Marrow (K562) 21402698
chr1 235124808 235126532 ZNF274 GTRD no Bone Marrow (K562) 107885432
chr1 235125488 235130598 ZNF274 GTRD no Bone Marrow (K562) 21402704
chr1 235125488 235130598 ZNF274 GTRD no Bone Marrow (K562) 21402705
chr1 235125488 235130598 ZNF274 GTRD no Bone Marrow (K562) 107885433
chr1 235125514 235131335 ZNF274 GTRD no Bone Marrow (K562) 21402706
chr1 235125514 235131335 ZNF274 GTRD no Bone Marrow (K562) 21402707
chr1 235125514 235131335 ZNF274 GTRD no Bone Marrow (K562) 107885434
chr1 235125675 235126455 ZNF274 GTRD no Bone Marrow (K562) 21402709
chr1 235125675 235126455 ZNF274 GTRD no Bone Marrow (K562) 107885435
chr1 235125722 235126360 ZNF143 GTRD no Epithelial (MCF-7) 21402710
chr1 235125722 235126360 ZNF143 GTRD no Epithelial (MCF-7) 107885436
chr1 235125895 235126306 ZNF274 GTRD no Bone Marrow (K562) 21402711
chr1 235125895 235126306 ZNF274 GTRD no Bone Marrow (K562) 107885437
chr1 235125954 235129911 ZNF274 GTRD no Bone Marrow (K562) 21402712
chr1 235125954 235129911 ZNF274 GTRD no Bone Marrow (K562) 107885438
chr1 235125957 235125972 MEF2C JASPAR yes 36339192
chr1 235125959 235125974 FOXP1 JASPAR yes 36339193
chr1 235125959 235125980 IRF1 JASPAR yes 36339194
chr1 235125962 235125977 FOXP1 JASPAR yes 36339196
chr1 235125963 235125978 STAT2 JASPAR yes 36339197
chr1 235125964 235125979 FOXP1 JASPAR yes 36339198
chr1 235125964 235125985 IRF1 JASPAR yes 36339199
chr1 235125965 235125986 IRF1 JASPAR yes 36339200
chr1 235125966 235125978 FOXC2 JASPAR yes 36339201
chr1 235125966 235125986 RREB1 JASPAR yes 36339202
chr1 235125967 235125978 FOXP2 JASPAR yes 36339203
chr1 235125969 235125984 FOXP1 JASPAR yes 36339204
chr1 235125969 235126485 TCF7L2 GTRD no Colon (HCT116) 21402713
chr1 235125969 235126485 TCF7L2 GTRD no Colon (HCT116) 107885439
chr1 235125970 235125991 IRF1 JASPAR yes 36339205
Genes associated with rs563052709[chr1:235125970], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More