EnhancerDB
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  3. rs56306905[chr17:80485364]
Enhancers that have rs56306905[chr17:80485364]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 80480565 80515355 enh4649
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs56306905[chr17:80485364]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 80485358 80485367 HIC2 JASPAR yes 56370366
chr17 80485360 80485370 SP1 JASPAR yes 56370367
chr17 80485361 80485365 LFA1 TRANSFAC yes 56370368
Genes associated with rs56306905[chr17:80485364], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More