EnhancerDB
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  3. rs563094576[chr1:19784831]
Enhancers that have rs563094576[chr1:19784831]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19747725 19800935 enh99
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs563094576[chr1:19784831]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19784826 19784847 IRF1 JASPAR yes 27193154
chr1 19784830 19784842 IRF1 JASPAR yes 27193155
chr1 19784830 19784844 IRF7 JASPAR yes 27193156
chr1 19784830 19784845 IRF9 JASPAR yes 27193157
chr1 19784830 19784850 RREB1 JASPAR yes 27193158
chr1 19784831 19784852 IRF1 JASPAR yes 27193159
Genes associated with rs563094576[chr1:19784831], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More