EnhancerDB
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  3. rs563115600[chr1:23441530]
Enhancers that have rs563115600[chr1:23441530]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 23435285 23459230 enh11606
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Ovary Thyroid Neural Stem Cells (H9) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs563115600[chr1:23441530]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 23441524 23441534 ALX3 JASPAR yes 27414019
chr1 23441524 23441534 ESX1 JASPAR yes 27414020
chr1 23441524 23441534 GSX1 JASPAR yes 27414021
chr1 23441524 23441534 GSX2 JASPAR yes 27414022
chr1 23441524 23441534 LBX2 JASPAR yes 27414023
chr1 23441524 23441534 RAX JASPAR yes 27414024
chr1 23441525 23441533 BARX1 JASPAR yes 27414025
chr1 23441525 23441533 BSX JASPAR yes 27414026
chr1 23441525 23441533 DLX6 JASPAR yes 27414027
chr1 23441525 23441533 ISX JASPAR yes 27414028
chr1 23441525 23441533 LBX1 JASPAR yes 27414029
chr1 23441525 23441533 LHX9 JASPAR yes 27414030
chr1 23441525 23441533 MSX1 JASPAR yes 27414031
chr1 23441525 23441533 MSX2 JASPAR yes 27414032
chr1 23441525 23441533 NKX6-2 JASPAR yes 27414033
chr1 23441525 23441533 PRRX1 JASPAR yes 27414034
chr1 23441525 23441533 RAX2 JASPAR yes 27414035
chr1 23441525 23441533 SHOX JASPAR yes 27414036
chr1 23441525 23441533 UNCX JASPAR yes 27414037
Genes associated with rs563115600[chr1:23441530], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More