EnhancerDB
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  3. rs563275907[chr1:52028568]
Enhancers that have rs563275907[chr1:52028568]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 52027839 52037840 enh360
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Prostate (RWPE1) Heart
Transcript factors that have rs563275907[chr1:52028568]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 52028555 52028570 JUND JASPAR yes 28851057
chr1 52028556 52028569 JUN JASPAR yes 28851058
chr1 52028559 52028572 NR2F1 JASPAR yes 28851059
chr1 52028560 52028568 CREB1 JASPAR yes 28851060
chr1 52028560 52028575 NR2C2 JASPAR yes 28851061
Genes associated with rs563275907[chr1:52028568], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More