EnhancerDB
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  3. rs563313375[chr6:112295640]
Enhancers that have rs563313375[chr6:112295640]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 112291245 112321335 enh23518
Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen
Transcript factors that have rs563313375[chr6:112295640]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 112295623 112295643 RREB1 JASPAR yes 104392788
chr6 112295625 112295645 RREB1 JASPAR yes 104392789
chr6 112295627 112295647 RREB1 JASPAR yes 104392790
chr6 112295629 112295649 RREB1 JASPAR yes 104392791
chr6 112295631 112295651 RREB1 JASPAR yes 104392792
chr6 112295632 112295652 RREB1 JASPAR yes 104392793
chr6 112295633 112295648 RUNX2 JASPAR yes 104392794
chr6 112295635 112295655 RREB1 JASPAR yes 104392795
chr6 112295637 112295657 RREB1 JASPAR yes 104392796
chr6 112295639 112295659 RREB1 JASPAR yes 104392797
Genes associated with rs563313375[chr6:112295640], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More