EnhancerDB
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  3. rs56333320[chr1:39652082]
Enhancers that have rs56333320[chr1:39652082]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 39647111 39665522 enh11761
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs56333320[chr1:39652082]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 39652079 39652091 HES5 JASPAR yes 28264193
chr1 39652079 39652091 HES7 JASPAR yes 28264194
chr1 39652080 39652090 HEY1 JASPAR yes 28264195
chr1 39652080 39652090 HEY2 JASPAR yes 28264196
Genes associated with rs56333320[chr1:39652082], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More