EnhancerDB
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  3. rs56335996[chr1:39649937]
Enhancers that have rs56335996[chr1:39649937]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 39647111 39665522 enh11761
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs56335996[chr1:39649937]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 39649932 39649938 SP1 TRANSFAC yes 28263853
chr1 39649933 39649938 SP1 TRANSFAC yes 28263854
chr1 39649937 39649952 RUNX2 JASPAR yes 28263855
Genes associated with rs56335996[chr1:39649937], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More