EnhancerDB
  1. Home
  2. SNP
  3. rs56336401[chr6:16321478]
Enhancers that have rs56336401[chr6:16321478]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 16314945 16326043 enh8974
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs56336401[chr6:16321478]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 16321469 16321484 TFAP2A JASPAR yes 100287119
chr6 16321472 16321483 TFAP2A JASPAR yes 100287120
chr6 16321472 16321483 TFAP2B JASPAR yes 100287121
chr6 16321472 16321484 TFAP2A JASPAR yes 100287122
chr6 16321472 16321484 TFAP2B JASPAR yes 100287123
chr6 16321472 16321484 TFAP2C JASPAR yes 100287124
chr6 16321473 16321482 TFAP2A JASPAR yes 100287125
chr6 16321475 16321487 ZBTB7B JASPAR yes 100287126
chr6 16321475 16321487 ZBTB7C JASPAR yes 100287127
chr6 16321476 16321488 ZBTB7A JASPAR yes 100287128
Genes associated with rs56336401[chr6:16321478], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More