EnhancerDB
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  3. rs563372240[chr12:109245196]
Enhancers that have rs563372240[chr12:109245196]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 109230004 109245900 enh14979
Bone Marrow (K562) Brain (SK-N-MC) Adrenal Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs563372240[chr12:109245196]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 109245190 109245200 ALX3 JASPAR yes 123627451
chr12 109245190 109245200 ESX1 JASPAR yes 123627452
chr12 109245190 109245200 GSX1 JASPAR yes 123627453
chr12 109245190 109245200 GSX2 JASPAR yes 123627454
chr12 109245190 109245200 LBX2 JASPAR yes 123627455
chr12 109245190 109245200 RAX JASPAR yes 123627456
chr12 109245191 109245199 BARX1 JASPAR yes 123627460
chr12 109245191 109245199 BSX JASPAR yes 123627461
chr12 109245191 109245199 DLX6 JASPAR yes 123627462
chr12 109245191 109245199 ISX JASPAR yes 123627463
chr12 109245191 109245199 LBX1 JASPAR yes 123627464
chr12 109245191 109245199 LHX9 JASPAR yes 123627465
chr12 109245191 109245199 MSX1 JASPAR yes 123627466
chr12 109245191 109245199 MSX2 JASPAR yes 123627467
chr12 109245191 109245199 NKX6-2 JASPAR yes 123627468
chr12 109245191 109245199 PRRX1 JASPAR yes 123627469
chr12 109245191 109245199 RAX2 JASPAR yes 123627470
chr12 109245191 109245199 SHOX JASPAR yes 123627471
chr12 109245191 109245199 UNCX JASPAR yes 123627472
chr12 109245192 109245202 PAX3 JASPAR yes 123627473
Genes associated with rs563372240[chr12:109245196], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More