EnhancerDB
  1. Home
  2. SNP
  3. rs563397220[chr6:11356202]
Enhancers that have rs563397220[chr6:11356202]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 11352354 11376815 enh23022
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Kidney Large Intestine Esophagus Astrocyte Blood (GM12878) Stomach Placenta Thyroid Uterus Peripheral Blood (MM.1S) Lung (PC-9) Pancreas Neural Stem Cells (H9) Blood (T-cell) Heart
Transcript factors that have rs563397220[chr6:11356202]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 11356197 11356211 PLAG1 JASPAR yes 99878380
chr6 11356202 11356209 E2F1 TRANSFAC yes 99878381
Genes associated with rs563397220[chr6:11356202], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More