EnhancerDB
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  3. rs563424486[chr16:11397052]
Enhancers that have rs563424486[chr16:11397052]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 11382725 11409295 enh3884
Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Blood (GM12878) Placenta Lung (PC-9) Spleen Muscle (Myotube) Liver (HepG2) Muscle (A673)
Transcript factors that have rs563424486[chr16:11397052]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 11395414 11397435 ZNF143 GTRD no Epithelial (MCF-7) 21690398
chr16 11395414 11397435 ZNF143 GTRD no Epithelial (MCF-7) 108181233
chr16 11395889 11397458 ZNF274 GTRD no Liver (HepG2) 21690399
chr16 11395889 11397458 ZNF274 GTRD no Liver (HepG2) 108181234
chr16 11396145 11397435 ZNF143 GTRD no Epithelial (MCF-7) 21690400
chr16 11396145 11397435 ZNF143 GTRD no Epithelial (MCF-7) 108181235
chr16 11397047 11397057 NFATC3 JASPAR yes 9503553
chr16 11397048 11397055 NFATC2 JASPAR yes 9503554
chr16 11397051 11397066 TFAP2A JASPAR yes 9503555
Genes associated with rs563424486[chr16:11397052], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More