EnhancerDB
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  3. rs563489406[chr17:28058442]
Enhancers that have rs563489406[chr17:28058442]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 28029886 28064015 enh4330
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs563489406[chr17:28058442]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 28058428 28058444 POU4F3 JASPAR yes 53754749
chr17 28058430 28058444 POU4F1 JASPAR yes 53754751
chr17 28058430 28058445 FOXP1 JASPAR yes 53754752
chr17 28058432 28058448 POU4F3 JASPAR yes 53754753
chr17 28058433 28058448 FOXA1 JASPAR yes 53754754
chr17 28058434 28058446 FOXI1 JASPAR yes 53754755
chr17 28058434 28058448 POU4F1 JASPAR yes 53754756
chr17 28058434 28058449 FOXP1 JASPAR yes 53754757
chr17 28058434 28058449 HNF1A JASPAR yes 53754758
chr17 28058435 28058447 FOXC2 JASPAR yes 53754759
chr17 28058435 28058449 ONECUT2 JASPAR yes 53754760
chr17 28058435 28058449 ONECUT3 JASPAR yes 53754761
chr17 28058436 28058447 FOXB1 JASPAR yes 53754762
chr17 28058436 28058447 FOXC1 JASPAR yes 53754763
chr17 28058436 28058447 PROP1 JASPAR yes 53754764
chr17 28058436 28058452 POU4F2 JASPAR yes 53754765
chr17 28058436 28058452 POU4F3 JASPAR yes 53754766
chr17 28058437 28058452 FOXA1 JASPAR yes 53754768
chr17 28058438 28058450 FOXI1 JASPAR yes 53754769
chr17 28058438 28058452 POU4F1 JASPAR yes 53754770
chr17 28058438 28058453 FOXP1 JASPAR yes 53754771
chr17 28058438 28058453 HNF1A JASPAR yes 53754772
chr17 28058439 28058451 FOXC2 JASPAR yes 53754773
chr17 28058439 28058453 ONECUT2 JASPAR yes 53754774
chr17 28058439 28058453 ONECUT3 JASPAR yes 53754775
chr17 28058440 28058451 FOXB1 JASPAR yes 53754776
chr17 28058440 28058451 FOXC1 JASPAR yes 53754777
chr17 28058440 28058451 PROP1 JASPAR yes 53754778
chr17 28058440 28058456 POU4F2 JASPAR yes 53754779
chr17 28058440 28058456 POU4F3 JASPAR yes 53754780
chr17 28058441 28058445 YY1 TRANSFAC yes 53754781
chr17 28058441 28058456 FOXA1 JASPAR yes 53754782
chr17 28058442 28058454 FOXI1 JASPAR yes 53754783
chr17 28058442 28058456 POU4F1 JASPAR yes 53754784
chr17 28058442 28058457 FOXP1 JASPAR yes 53754785
chr17 28058442 28058457 HNF1A JASPAR yes 53754786
Genes associated with rs563489406[chr17:28058442], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More