EnhancerDB
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  3. rs56349841[chr19:2610346]
Enhancers that have rs56349841[chr19:2610346]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 2605719 2641695 enh4960
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs56349841[chr19:2610346]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 2610335 2610351 POU4F3 JASPAR yes 112082627
chr19 2610336 2610351 FOXA1 JASPAR yes 112082628
chr19 2610337 2610349 FOXI1 JASPAR yes 112082629
chr19 2610337 2610351 POU4F1 JASPAR yes 112082630
chr19 2610337 2610352 FOXP1 JASPAR yes 112082631
chr19 2610337 2610352 HNF1A JASPAR yes 112082632
chr19 2610338 2610350 FOXC2 JASPAR yes 112082633
chr19 2610338 2610352 ONECUT2 JASPAR yes 112082634
chr19 2610338 2610352 ONECUT3 JASPAR yes 112082635
chr19 2610339 2610350 FOXB1 JASPAR yes 112082636
chr19 2610339 2610350 FOXC1 JASPAR yes 112082637
chr19 2610339 2610350 PROP1 JASPAR yes 112082638
chr19 2610342 2610354 FOXC2 JASPAR yes 112082640
chr19 2610342 2610356 FOXF2 JASPAR yes 112082641
chr19 2610342 2610356 ONECUT3 JASPAR yes 112082642
chr19 2610342 2610358 POU4F2 JASPAR yes 112082643
chr19 2610342 2610358 POU4F3 JASPAR yes 112082644
chr19 2610344 2610348 YY1 TRANSFAC yes 112082645
Genes associated with rs56349841[chr19:2610346], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More