EnhancerDB
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  3. rs56349943[chr16:29170567]
Enhancers that have rs56349943[chr16:29170567]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 29150646 29173335 enh16623
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Ovary Esophagus Astrocyte Blood (T-cell) Lung (A549) Stomach Placenta Uterus Lung (PC-9) Breast Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs56349943[chr16:29170567]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 29170341 29171032 ZBTB33 GTRD no Brain (SK-N-SH) 21701846
chr16 29170341 29171032 ZBTB33 GTRD no Brain (SK-N-SH) 108191379
chr16 29170400 29171022 MYOD GTRD no Muscle (Myoblast) 108191380
chr16 29170406 29171716 ZBTB33 GTRD no Brain (SK-N-SH) 21701847
chr16 29170406 29171716 ZBTB33 GTRD no Brain (SK-N-SH) 108191381
chr16 29170555 29170570 ZIC3 JASPAR yes 10246631
chr16 29170555 29170570 ZIC4 JASPAR yes 10246632
chr16 29170556 29170570 ZIC1 JASPAR yes 10246633
chr16 29170557 29170577 RREB1 JASPAR yes 10246634
chr16 29170559 29170579 RREB1 JASPAR yes 10246635
chr16 29170560 29170580 RREB1 JASPAR yes 10246636
chr16 29170561 29170581 RREB1 JASPAR yes 10246637
chr16 29170562 29170582 RREB1 JASPAR yes 10246638
chr16 29170564 29170569 SP1 TRANSFAC yes 10246639
chr16 29170564 29170574 ZNF740 JASPAR yes 10246640
chr16 29170564 29170584 RREB1 JASPAR yes 10246641
chr16 29170565 29170575 SP1 JASPAR yes 10246642
chr16 29170565 29170575 ZNF740 JASPAR yes 10246643
chr16 29170567 29170577 ZNF740 JASPAR yes 10246644
Genes associated with rs56349943[chr16:29170567], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More