EnhancerDB
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  3. rs563506296[chr1:1793430]
Enhancers that have rs563506296[chr1:1793430]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 1770710 1799155 enh6
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs563506296[chr1:1793430]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 1792784 1794069 AR GTRD no Prostate (PC-3) 107801799
chr1 1793424 1793436 TFAP2A JASPAR yes 26208403
chr1 1793424 1793436 TFAP2B JASPAR yes 26208404
chr1 1793424 1793436 TFAP2C JASPAR yes 26208405
chr1 1793424 1793439 TFAP2A JASPAR yes 26208406
chr1 1793425 1793434 TFAP2A JASPAR yes 26208407
chr1 1793427 1793439 ZBTB7B JASPAR yes 26208408
chr1 1793428 1793440 ZBTB7A JASPAR yes 26208409
chr1 1793430 1793445 NR2C2 JASPAR yes 26208410
Genes associated with rs563506296[chr1:1793430], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More