EnhancerDB
  1. Home
  2. SNP
  3. rs563540673[chr11:62267145]
Enhancers that have rs563540673[chr11:62267145]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 62262575 62280595 enh13974
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr11 62267084 62267180 vista10500
VISTA
Transcript factors that have rs563540673[chr11:62267145]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 62266911 62267435 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21488814
chr11 62266911 62267435 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107974484
chr11 62267072 62267528 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21488815
chr11 62267072 62267528 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107974485
chr11 62267106 62267307 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 107974486
chr11 62267145 62267150 SP1 TRANSFAC yes 39209261
chr11 62267145 62267150 SP1 TRANSFAC yes 114080439
Genes associated with rs563540673[chr11:62267145], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More