EnhancerDB
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  3. rs563552225[chr12:109110159]
Enhancers that have rs563552225[chr12:109110159]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 109103554 109121615 enh14974
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Stomach Skin (Keratinocyte) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs563552225[chr12:109110159]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 109110153 109110168 MEF2A JASPAR yes 123615685
chr12 109110154 109110159 GATA2 JASPAR yes 123615686
chr12 109110155 109110167 MEF2A JASPAR yes 123615687
chr12 109110156 109110167 FOXC1 JASPAR yes 123615688
chr12 109110157 109110161 YY1 TRANSFAC yes 123615689
chr12 109110159 109110169 HOXD13 JASPAR yes 123615690
chr12 109110159 109110170 HOXA10 JASPAR yes 123615691
Genes associated with rs563552225[chr12:109110159], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More