EnhancerDB
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  3. rs563590466[chr3:58035748]
Enhancers that have rs563590466[chr3:58035748]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 58016005 58062055 enh20647
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs563590466[chr3:58035748]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 58035742 58035763 IRF1 JASPAR yes 2669565
chr3 58035743 58035764 IRF1 JASPAR yes 2669566
chr3 58035744 58035765 IRF1 JASPAR yes 2669567
chr3 58035746 58035761 FOXP1 JASPAR yes 2669568
chr3 58035746 58035767 IRF1 JASPAR yes 2669569
chr3 58035747 58035762 FOXP1 JASPAR yes 2669570
chr3 58035747 58035768 IRF1 JASPAR yes 2669571
chr3 58035748 58035763 FOXP1 JASPAR yes 2669572
chr3 58035748 58035769 IRF1 JASPAR yes 2669573
Genes associated with rs563590466[chr3:58035748], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More