EnhancerDB
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  3. rs563694561[chr14:55104009]
Enhancers that have rs563694561[chr14:55104009]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr14 55101597 55134083 enh3199
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Stomach Muscle (A673) Placenta Uterus Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs563694561[chr14:55104009]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr14 55101594 55104991 ZNF143 GTRD no Epithelial (MCF-7) 21619424
chr14 55101594 55104991 ZNF143 GTRD no Epithelial (MCF-7) 108103110
chr14 55101602 55105198 ZNF274 GTRD no Blood (GM12878) 108103111
chr14 55101698 55105012 ZNF274 GTRD no Blood (GM12878) 108103112
chr14 55101764 55104980 ZBTB33 GTRD no Lung (A549) 108103113
chr14 55101778 55105011 ZNF274 GTRD no Cervix (HeLa-S3) 21619425
chr14 55101778 55105011 ZNF274 GTRD no Cervix (HeLa-S3) 108103114
chr14 55101890 55105042 ZNF274 GTRD no Bone Marrow (K562) 108103115
chr14 55101907 55104935 ZNF274 GTRD no Blood (GM12878) 108103116
chr14 55101961 55104936 ZNF274 GTRD no Cervix (HeLa-S3) 21619426
chr14 55101961 55104936 ZNF274 GTRD no Cervix (HeLa-S3) 108103117
chr14 55102699 55105055 ZNF143 GTRD no Epithelial (MCF-7) 21619427
chr14 55102699 55105055 ZNF143 GTRD no Epithelial (MCF-7) 108103118
chr14 55102726 55105013 ZNF143 GTRD no Epithelial (MCF-7) 21619428
chr14 55102726 55105013 ZNF143 GTRD no Epithelial (MCF-7) 108103119
chr14 55102744 55105073 ZNF143 GTRD no Epithelial (MCF-7) 21619429
chr14 55102744 55105073 ZNF143 GTRD no Epithelial (MCF-7) 108103120
chr14 55102872 55105049 ZNF143 GTRD no Epithelial (MCF-7) 21619430
chr14 55102872 55105049 ZNF143 GTRD no Epithelial (MCF-7) 108103121
chr14 55102879 55105129 ZNF143 GTRD no Epithelial (MCF-7) 21619431
chr14 55102879 55105129 ZNF143 GTRD no Epithelial (MCF-7) 108103122
chr14 55102964 55105027 ZNF143 GTRD no Epithelial (MCF-7) 21619432
chr14 55102964 55105027 ZNF143 GTRD no Epithelial (MCF-7) 108103123
chr14 55104009 55104027 RARA JASPAR yes 115495171
Genes associated with rs563694561[chr14:55104009], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More