EnhancerDB
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  3. rs563774549[chr6:30788839]
Enhancers that have rs563774549[chr6:30788839]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 30740965 30818275 enh23149
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs563774549[chr6:30788839]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 30788833 30788854 IRF1 JASPAR yes 101054953
chr6 30788838 30788853 FOXP1 JASPAR yes 101054954
chr6 30788839 30788854 FOXP1 JASPAR yes 101054955
Genes associated with rs563774549[chr6:30788839], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More