EnhancerDB
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  3. rs563828770[chr14:55109654]
Enhancers that have rs563828770[chr14:55109654]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr14 55101597 55134083 enh3199
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Stomach Muscle (A673) Placenta Uterus Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Heart
chr14 55109619 55109800 vista17832
VISTA
Transcript factors that have rs563828770[chr14:55109654]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr14 55109646 55109660 GLIS2 JASPAR yes 107551470
chr14 55109646 55109660 GLIS3 JASPAR yes 107551471
chr14 55109646 55109660 GLIS2 JASPAR yes 115495923
chr14 55109646 55109660 GLIS3 JASPAR yes 115495924
chr14 55109652 55109666 PLAG1 JASPAR yes 107551472
chr14 55109652 55109666 PLAG1 JASPAR yes 115495925
Genes associated with rs563828770[chr14:55109654], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More