EnhancerDB
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  3. rs56389244[chr12:109077172]
Enhancers that have rs56389244[chr12:109077172]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 109075725 109093399 enh14973
Bone Marrow (K562) Astrocyte Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Blood (OCI-LY7) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs56389244[chr12:109077172]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 109077166 109077175 THAP1 JASPAR yes 123612002
chr12 109077167 109077186 PAX5 JASPAR yes 123612003
chr12 109077169 109077173 LFA1 TRANSFAC yes 123612004
Genes associated with rs56389244[chr12:109077172], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More