EnhancerDB
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  3. rs563907195[chr15:42208571]
Enhancers that have rs563907195[chr15:42208571]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 42202285 42235244 enh3549
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs563907195[chr15:42208571]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 42208564 42208575 TFAP2A JASPAR yes 23004619
chr15 42208564 42208575 TFAP2B JASPAR yes 23004620
chr15 42208565 42208574 TFAP2A JASPAR yes 23004621
Genes associated with rs563907195[chr15:42208571], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More