EnhancerDB
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  3. rs563964669[chr6:47093939]
Enhancers that have rs563964669[chr6:47093939]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 47092105 47126155 enh23288
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs563964669[chr6:47093939]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 47093923 47093943 RREB1 JASPAR yes 102000542
chr6 47093927 47093947 RREB1 JASPAR yes 102000543
chr6 47093930 47093942 FOXI1 JASPAR yes 102000544
chr6 47093930 47093945 FOXP1 JASPAR yes 102000545
chr6 47093931 47093943 FOXC2 JASPAR yes 102000546
chr6 47093933 47093944 FOXA1 JASPAR yes 102000547
chr6 47093933 47093954 IRF1 JASPAR yes 102000548
chr6 47093934 47093949 FOXP1 JASPAR yes 102000549
chr6 47093935 47093946 FOXP2 JASPAR yes 102000550
chr6 47093935 47093947 FOXC2 JASPAR yes 102000551
chr6 47093935 47093950 STAT2 JASPAR yes 102000552
chr6 47093939 47093954 FOXP1 JASPAR yes 102000553
chr6 47093939 47093960 IRF1 JASPAR yes 102000554
Genes associated with rs563964669[chr6:47093939], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More