EnhancerDB
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  3. rs563982938[chr1:113451638]
Enhancers that have rs563982938[chr1:113451638]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 113444365 113452393 enh12155
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Stomach Muscle (A673) Placenta Colon (HCT116) Uterus Embryonic Stem Cell Line (H1-hESC) Pancreas Neural Stem Cells (H9) Heart
Transcript factors that have rs563982938[chr1:113451638]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 113451619 113451639 RREB1 JASPAR yes 31601040
chr1 113451622 113451643 IRF1 JASPAR yes 31601043
chr1 113451624 113451644 RREB1 JASPAR yes 31601044
chr1 113451625 113452079 ZNF143 GTRD no Epithelial (MCF-7) 21329761
chr1 113451627 113451639 IRF1 JASPAR yes 31601045
chr1 113451627 113451642 FOXP1 JASPAR yes 31601046
chr1 113451627 113451648 IRF1 JASPAR yes 31601047
chr1 113451629 113451649 RREB1 JASPAR yes 31601048
chr1 113451632 113451644 IRF1 JASPAR yes 31601049
chr1 113451632 113451647 FOXP1 JASPAR yes 31601050
chr1 113451632 113451653 IRF1 JASPAR yes 31601051
chr1 113451634 113451654 RREB1 JASPAR yes 31601052
chr1 113451637 113451649 IRF1 JASPAR yes 31601053
chr1 113451637 113451652 FOXP1 JASPAR yes 31601054
chr1 113451638 113451659 IRF1 JASPAR yes 31601055
Genes associated with rs563982938[chr1:113451638], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More