EnhancerDB
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  3. rs56398356[chr12:52521995]
Enhancers that have rs56398356[chr12:52521995]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52508085 52522855 enh2356
Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Spleen Liver (HepG2) Muscle (A673) Heart
Transcript factors that have rs56398356[chr12:52521995]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52519065 52523398 P63 GTRD no Skin (Keratinocyte) 21546231
chr12 52519499 52523414 P63 GTRD no Skin (Keratinocyte) 21546243
chr12 52520172 52522261 P63 GTRD no Skin (Keratinocyte) 21546246
chr12 52520293 52522962 AR GTRD no Prostate (PC-3) 21546248
chr12 52520784 52522202 ZNF143 GTRD no Epithelial (MCF-7) 21546249
chr12 52521045 52523202 P63 GTRD no Skin (Keratinocyte) 21546258
chr12 52521574 52522203 ZNF143 GTRD no Epithelial (MCF-7) 21546268
chr12 52521596 52523194 ZNF143 GTRD no Epithelial (MCF-7) 21546269
chr12 52521781 52522884 ZNF143 GTRD no Epithelial (MCF-7) 21546270
chr12 52521921 52522371 ZNF274 GTRD no Liver (HepG2) 21546271
chr12 52521959 52522497 ZNF274 GTRD no Liver (HepG2) 21546272
chr12 52521972 52522464 ZNF274 GTRD no Liver (HepG2) 21546273
chr12 52521976 52521997 ZNF263 JASPAR yes 120919779
chr12 52521982 52522003 ZNF263 JASPAR yes 120919784
chr12 52521983 52521998 PRDM1 JASPAR yes 120919785
chr12 52521995 52522000 TFAP2A TRANSFAC yes 120919786
chr12 52521995 52522001 MZF1 JASPAR yes 120919787
Genes associated with rs56398356[chr12:52521995], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More