EnhancerDB
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  3. rs564000616[chr2:102383526]
Enhancers that have rs564000616[chr2:102383526]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 102318065 102395755 enh5746
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr2 102383406 102383725 vista32521
VISTA
Transcript factors that have rs564000616[chr2:102383526]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 102383521 102383527 ETS1 JASPAR yes 22102491
chr2 102383521 102383527 ETS1 JASPAR yes 75837485
chr2 102383525 102383535 HMBOX1 JASPAR yes 22102492
chr2 102383525 102383535 HMBOX1 JASPAR yes 75837486
Genes associated with rs564000616[chr2:102383526], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More