EnhancerDB
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  3. rs56404463[chr1:39632088]
Enhancers that have rs56404463[chr1:39632088]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 39628825 39647095 enh11760
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Liver Stomach Muscle (A673) Placenta Thyroid Uterus Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Neural Stem Cells (H9) Heart
Transcript factors that have rs56404463[chr1:39632088]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 39632084 39632099 FOXA1 JASPAR yes 28261351
chr1 39632085 39632097 FOXI1 JASPAR yes 28261352
chr1 39632086 39632098 FOXC2 JASPAR yes 28261353
chr1 39632086 39632100 ONECUT3 JASPAR yes 28261354
chr1 39632087 39632098 FOXB1 JASPAR yes 28261355
chr1 39632087 39632098 FOXC1 JASPAR yes 28261356
chr1 39632087 39632103 POU4F2 JASPAR yes 28261357
chr1 39632087 39632103 POU4F3 JASPAR yes 28261358
chr1 39632088 39632092 YY1 TRANSFAC yes 28261359
chr1 39632088 39632103 FOXA1 JASPAR yes 28261360
Genes associated with rs56404463[chr1:39632088], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More