EnhancerDB
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  3. rs564080980[chr1:27781233]
Enhancers that have rs564080980[chr1:27781233]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27742945 27784244 enh174
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs564080980[chr1:27781233]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27781221 27781233 MEF2A JASPAR yes 27696478
chr1 27781221 27781233 MEF2B JASPAR yes 27696479
chr1 27781221 27781233 MEF2D JASPAR yes 27696480
chr1 27781223 27781240 ZNF410 JASPAR yes 27696481
Genes associated with rs564080980[chr1:27781233], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More