EnhancerDB
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  3. rs56408124[chr1:181083868]
Enhancers that have rs56408124[chr1:181083868]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 181061310 181091955 enh12430
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs56408124[chr1:181083868]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 181083509 181085142 ZNF143 GTRD no Epithelial (MCF-7) 21354749
chr1 181083610 181084939 ZNF143 GTRD no Epithelial (MCF-7) 21354750
chr1 181083696 181084086 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21354751
chr1 181083715 181085389 ZNF274 GTRD no Bone Marrow (K562) 21354752
chr1 181083729 181084039 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21354753
chr1 181083752 181085029 ZNF143 GTRD no Epithelial (MCF-7) 21354754
chr1 181083770 181085035 ZNF274 GTRD no Bone Marrow (K562) 21354755
chr1 181083786 181084948 ZNF143 GTRD no Epithelial (MCF-7) 21354756
chr1 181083794 181085151 ZNF274 GTRD no Bone Marrow (K562) 21354757
chr1 181083829 181084771 ZNF143 GTRD no Epithelial (MCF-7) 21354758
chr1 181083832 181084711 ZNF274 GTRD no Cervix (HeLa-S3) 21354759
chr1 181083853 181084907 ZNF274 GTRD no Bone Marrow (K562) 21354760
chr1 181083859 181085317 ZNF274 GTRD no Bone Marrow (K562) 21354761
chr1 181083866 181083879 SCRT2 JASPAR yes 33554579
Genes associated with rs56408124[chr1:181083868], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More