EnhancerDB
  1. Home
  2. SNP
  3. rs56409846[chr2:38654130]
Enhancers that have rs56409846[chr2:38654130]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 38653105 38683515 enh33236
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Stomach Colon (HCT116) Breast Uterus Thyroid Lung (PC-9) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs56409846[chr2:38654130]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 38654124 38654130 GATA1 TRANSFAC yes 73138939
chr2 38654127 38654134 NKX3-1 JASPAR yes 73138940
Genes associated with rs56409846[chr2:38654130], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More