EnhancerDB
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  3. rs564129922[chr12:125194406]
Enhancers that have rs564129922[chr12:125194406]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125176905 125261395 enh2676
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs564129922[chr12:125194406]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125193448 125194457 ZBTB33 GTRD no Lung (A549) 21582106
chr12 125193459 125194565 ZBTB33 GTRD no Lung (A549) 21582107
chr12 125193572 125194473 ZNF274 GTRD no Cervix (HeLa-S3) 21582109
chr12 125193584 125194533 ZBTB33 GTRD no Lung (A549) 21582110
chr12 125193643 125194578 ZNF143 GTRD no Epithelial (MCF-7) 21582111
chr12 125193646 125194521 ZNF274 GTRD no Bone Marrow (K562) 21582112
chr12 125193719 125194629 ZBTB33 GTRD no Lung (A549) 21582116
chr12 125193758 125194657 ZBTB33 GTRD no Lung (A549) 21582118
chr12 125193793 125195570 ZBTB33 GTRD no Brain (SK-N-SH) 21582123
chr12 125193797 125194576 ZNF143 GTRD no Epithelial (MCF-7) 21582125
chr12 125193903 125194739 ZBTB33 GTRD no Brain (SK-N-SH) 21582134
chr12 125193916 125194533 ZBTB33 GTRD no Brain (SK-N-SH) 21582135
chr12 125193930 125194667 ZNF274 GTRD no Bone Marrow (K562) 21582136
chr12 125193959 125194798 TCF7L2 GTRD no Colon (HCT116) 21582137
chr12 125194052 125194608 ZBTB33 GTRD no Brain (SK-N-SH) 21582138
chr12 125194064 125194659 ZBTB33 GTRD no Brain (SK-N-SH) 21582139
chr12 125194072 125194540 ZBTB33 GTRD no Brain (SK-N-SH) 21582140
chr12 125194091 125194682 ZBTB33 GTRD no Brain (SK-N-SH) 21582141
chr12 125194108 125194493 ZNF274 GTRD no Bone Marrow (K562) 21582142
chr12 125194110 125194653 ZBTB33 GTRD no Brain (SK-N-SH) 21582143
chr12 125194156 125194563 ZBTB33 GTRD no Brain (SK-N-SH) 21582144
chr12 125194158 125194743 TCF7L2 GTRD no Colon (HCT116) 21582145
chr12 125194160 125194528 ZNF274 GTRD no Bone Marrow (K562) 21582146
chr12 125194174 125194568 ZBTB33 GTRD no Brain (SK-N-SH) 21582147
chr12 125194187 125194471 TCF7L2 GTRD no Colon (HCT116) 21582148
chr12 125194210 125194564 ZNF143 GTRD no Epithelial (MCF-7) 21582149
chr12 125194223 125194623 ZNF143 GTRD no Epithelial (MCF-7) 21582150
chr12 125194329 125196454 ZNF274 GTRD no Bone Marrow (K562) 21582151
chr12 125194395 125194410 HSF1 JASPAR yes 124411735
chr12 125194396 125194409 HSF1 JASPAR yes 124411736
chr12 125194396 125194409 HSF2 JASPAR yes 124411737
chr12 125194396 125194409 HSF4 JASPAR yes 124411738
chr12 125194397 125194407 TEAD1 JASPAR yes 124411739
chr12 125194397 125194407 TEAD4 JASPAR yes 124411740
chr12 125194397 125194409 TEAD1 JASPAR yes 124411741
chr12 125194398 125194406 TEAD3 JASPAR yes 124411742
chr12 125194400 125194415 HSF1 JASPAR yes 124411743
chr12 125194401 125194414 HSF1 JASPAR yes 124411744
chr12 125194401 125194414 HSF4 JASPAR yes 124411745
Genes associated with rs564129922[chr12:125194406], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More