EnhancerDB
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  3. rs564224939[chr3:58024167]
Enhancers that have rs564224939[chr3:58024167]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 58016005 58062055 enh20647
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs564224939[chr3:58024167]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 58024161 58024167 YY1 JASPAR yes 2667680
chr3 58024161 58024182 IRF1 JASPAR yes 2667681
chr3 58024163 58024178 STAT2 JASPAR yes 2667682
chr3 58024166 58024181 FOXP1 JASPAR yes 2667683
Genes associated with rs564224939[chr3:58024167], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More