EnhancerDB
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  3. rs564246961[chr5:172234371]
Enhancers that have rs564246961[chr5:172234371]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172200585 172237795 enh22816
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
chr5 172234136 172234644 vista50179
VISTA
Transcript factors that have rs564246961[chr5:172234371]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172233991 172234780 POLR2A UCSC Txn Factor no Conserved 108537518
chr5 172234184 172234468 ELF1 UCSC Txn Factor no Conserved 108537519
chr5 172234245 172234525 CREB1 UCSC Txn Factor no Conserved 108537520
chr5 172234353 172234371 RARA JASPAR yes 67830121
chr5 172234353 172234371 RARA JASPAR yes 70763799
Genes associated with rs564246961[chr5:172234371], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More