EnhancerDB
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  3. rs564462019[chr1:19766646]
Enhancers that have rs564462019[chr1:19766646]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19747725 19800935 enh99
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs564462019[chr1:19766646]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19766629 19766650 IRF1 JASPAR yes 27190461
chr1 19766630 19766651 IRF1 JASPAR yes 27190465
chr1 19766631 19766646 STAT2 JASPAR yes 27190466
chr1 19766635 19766656 IRF1 JASPAR yes 27190467
chr1 19766636 19766651 FOXP1 JASPAR yes 27190468
chr1 19766636 19766657 IRF1 JASPAR yes 27190469
chr1 19766640 19766661 IRF1 JASPAR yes 27190470
Genes associated with rs564462019[chr1:19766646], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More