EnhancerDB
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  3. rs564487546[chr12:65058827]
Enhancers that have rs564487546[chr12:65058827]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 65039765 65087550 enh2405
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs564487546[chr12:65058827]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 65058820 65058835 HNF4G JASPAR yes 121423194
chr12 65058821 65058835 NR2F1 JASPAR yes 121423195
chr12 65058821 65058835 RXRB JASPAR yes 121423196
chr12 65058821 65058835 RXRG JASPAR yes 121423197
chr12 65058821 65058836 HNF4A JASPAR yes 121423198
Genes associated with rs564487546[chr12:65058827], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More