EnhancerDB
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  3. rs564499519[chr2:38640616]
Enhancers that have rs564499519[chr2:38640616]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 38631155 38647575 enh5424
Skin (Keratinocyte) Liver (HepG2) Epithelial (MCF-7) Large Intestine Prostate (RWPE1) Esophagus Blood (OCI-LY7) Stomach Placenta Breast Uterus Peripheral Blood (MM.1S) Blood (Karpas-422) Adrenal Pancreas Spleen Neural Stem Cells (H9) Heart
Transcript factors that have rs564499519[chr2:38640616]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 38640605 38640617 YY1 JASPAR yes 73137882
chr2 38640613 38640628 FOXP1 JASPAR yes 73137883
chr2 38640614 38640629 FOXP1 JASPAR yes 73137884
chr2 38640615 38640621 TBP TRANSFAC yes 73137885
chr2 38640615 38640630 FOXP1 JASPAR yes 73137886
chr2 38640615 38640636 IRF1 JASPAR yes 73137887
chr2 38640616 38640631 FOXP1 JASPAR yes 73137888
chr2 38640616 38640637 IRF1 JASPAR yes 73137889
Genes associated with rs564499519[chr2:38640616], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More