EnhancerDB
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  3. rs564540388[chr14:77484681]
Enhancers that have rs564540388[chr14:77484681]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr14 77458104 77493935 enh3336
Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs564540388[chr14:77484681]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr14 77484069 77485020 ZNF143 GTRD no Epithelial (MCF-7) 21632174
chr14 77484073 77485017 TCF7L2 GTRD no Colon (HCT116) 21632175
chr14 77484084 77485103 ZNF143 GTRD no Epithelial (MCF-7) 21632176
chr14 77484177 77484771 TCF7L2 GTRD no Colon (HCT116) 21632177
chr14 77484561 77485078 TCF7L2 GTRD no Colon (HCT116) 21632178
chr14 77484680 77484691 STAT3 JASPAR yes 116720654
Genes associated with rs564540388[chr14:77484681], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More