EnhancerDB
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  3. rs564558662[chr17:56021576]
Enhancers that have rs564558662[chr17:56021576]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55982093 56031480 enh4496
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs564558662[chr17:56021576]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 56021566 56021587 IRF1 JASPAR yes 55002944
chr17 56021567 56021588 IRF1 JASPAR yes 55002945
chr17 56021568 56021579 FOXC1 JASPAR yes 55002946
chr17 56021570 56021585 FOXP1 JASPAR yes 55002948
chr17 56021571 56021586 FOXP1 JASPAR yes 55002949
chr17 56021572 56021587 FOXP1 JASPAR yes 55002950
chr17 56021573 56021588 FOXP1 JASPAR yes 55002951
chr17 56021574 56021589 FOXP1 JASPAR yes 55002952
chr17 56021575 56021590 FOXP1 JASPAR yes 55002953
chr17 56021576 56021591 FOXP1 JASPAR yes 55002954
Genes associated with rs564558662[chr17:56021576], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More