EnhancerDB
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  3. rs564798495[chr1:8450904]
Enhancers that have rs564798495[chr1:8450904]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 8427225 8493496 enh42
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 8450820 8451072 vista247
VISTA
Transcript factors that have rs564798495[chr1:8450904]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 8450897 8450912 ZIC3 JASPAR yes 26547211
chr1 8450897 8450912 ZIC4 JASPAR yes 26547212
chr1 8450897 8450912 ZIC3 JASPAR yes 118225118
chr1 8450897 8450912 ZIC4 JASPAR yes 118225119
chr1 8450898 8450912 GLIS2 JASPAR yes 26547213
chr1 8450898 8450912 GLIS3 JASPAR yes 26547214
chr1 8450898 8450912 ZIC1 JASPAR yes 26547215
chr1 8450898 8450912 GLIS2 JASPAR yes 118225120
chr1 8450898 8450912 GLIS3 JASPAR yes 118225121
chr1 8450898 8450912 ZIC1 JASPAR yes 118225122
Genes associated with rs564798495[chr1:8450904], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More